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int [2018-06-07 18:55:51]
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int [2018-06-07 18:55:51]

integrase
locus
BSU04800
pI
9.76
mw
43.32 kDa
protein length
368 aa Sequence Blast
gene length
1104 bp Sequence Blast
function
excision of the conjugative transposon ICEBs1 from the trnS-leu2 locus
product
integrase
essential
no
synonyms
ydcL
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 5|Prophages and mobile genetic elements] → [category|SW 5.2|Mobile genetic elements] → [category|SW 5.2.1|ICEBs1]

    • Gene

    Coordinates
    529,505 → 530,611

    The protein

    Protein family

  • 'phage' integrase family (according to Swiss-Prot)

    • Structure

  • [PDB|4A8E] (25% identity)

    • Expression and Regulation

    Operons

    genes
    [gene|DD1C8F3A4809785BD6A6047D39B42AB2C605E161|immR]-[gene|1599BBAC05EB62A847F73572CD777BC472301DE8|immA]-[gene|47AE982C5E71F31B5AF04C4F50593C2629F8EDAF|int]
    description
    [pubmed|22383849]
    view in new tab

    Biological materials

    Mutant

  • BKE04800 (Δ[gene|47AE982C5E71F31B5AF04C4F50593C2629F8EDAF|int]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE04800 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTATTTCTCCTTTAAC, downstream forward: _UP4_TAGGTAAGTGGGCAGTTTGT
  • BKK04800 (Δ[gene|47AE982C5E71F31B5AF04C4F50593C2629F8EDAF|int]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK04800 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTATTTCTCCTTTAAC, downstream forward: _UP4_TAGGTAAGTGGGCAGTTTGT

    • References

  • 18005101